STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BcorBCL-6 corepressor isoform X1. (1757 aa)    
Predicted Functional Partners:
Pcgf1
Polycomb group RING finger protein 1 isoform X1.
    
 0.952
Bcl6
B-cell lymphoma 6 protein isoform X1.
    
 0.946
Mllt3
YEATS domain-containing protein 1/3.
    
 
 0.891
Kdm2b
F-box and leucine-rich repeat protein 10/11.
   
 0.869
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.818
Bcl6b
B-cell CLL/lymphoma 6 member B protein.
    
 0.814
Pcgf6
Polycomb group RING finger protein 6.
    
 0.784
Mllt1
YEATS domain-containing protein 1/3.
    
 
 0.758
Rybp
RING1 and YY1-binding protein.
    
 
 0.740
Yaf2
YY1-associated factor 2 isoform X1.
    
 
 0.723
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.