STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NcanNeurocan core protein. (1304 aa)    
Predicted Functional Partners:
Dcn
Decorin.
    
 0.777
Bcan
Brevican core protein.
    
0.766
ENSCCNP00000000656
annotation not available
    
0.754
Cd44
CD44 antigen.
    
 
 0.745
Ptprz1
Receptor-type tyrosine-protein phosphatase zeta.
    
 0.682
ENSCCNP00000017710
annotation not available
  
 
0.667
Eln
Elastin isoform X1.
    
 0.589
L1cam
L1 cell adhesion molecule.
   
 0.571
ENSCCNP00000026659
LOW QUALITY PROTEIN: fibronectin-like.
   
 0.553
Sdc3
Syndecan-3 isoform X1.
     
 0.545
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.