STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt13Keratin, type I cytoskeletal 13. (435 aa)    
Predicted Functional Partners:
Krt4
Keratin, type II cytoskeletal 4.
   
 
0.933
ENSCCNP00000000273
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.463
Krt8
Keratin, type II cytoskeletal 8.
   
0.446
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.439
ENSCCNP00000020974
Keratin, type II cytoskeletal 6A-like.
   
0.439
ENSCCNP00000020988
Keratin, type II cytoskeletal 6A.
   
0.439
Tep1
LOW QUALITY PROTEIN: telomerase protein component 1.
   
 0.438
Ash2l
LOW QUALITY PROTEIN: set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.437
Kdm6b
Lysine-specific demethylase 6B isoform X1.
   
 0.424
ENSCCNP00000002609
Uncharacterized protein LOC109683645.
    
 0.417
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.