STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec24cProtein transport protein Sec24C isoform X1. (1095 aa)    
Predicted Functional Partners:
Sec13
Protein SEC13 homolog isoform X1.
   
 0.999
Sec16b
SEC16 homolog B (S. cerevisiae).
   
 0.976
Sec23b
Protein transport protein Sec23B.
   
0.873
Sec23a
Protein transport protein Sec23A isoform X1.
   
 0.873
ENSCCNP00000022200
Protein transport protein Sec23A-like.
   
 0.873
Sec24b
Protein transport protein Sec24B isoform X1.
   
0.836
Sec24a
Protein transport protein Sec24A.
   
0.836
Trappc4
Trafficking protein particle complex subunit 4.
     
 0.798
Sec31a
Sec31 homolog A (S. cerevisiae).
   
 0.790
ENSCCNP00000032900
annotation not available
   
 0.790
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.