STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Stub1STIP1 homology and U-box containing protein 1. (303 aa)    
Predicted Functional Partners:
Ube2d1
Ubiquitin-conjugating enzyme E2D 1.
   
 0.985
Hspa4
LOW QUALITY PROTEIN: heat shock 70 kDa protein 4.
    
 
 0.980
ENSCCNP00000017777
Ubiquitin-conjugating enzyme E2 N.
   
 0.968
ENSCCNP00000009504
annotation not available
   
 0.901
Bag3
BAG family molecular chaperone regulator 3 isoform X1.
    
 0.897
Hspa8
Heat shock cognate 71 kDa protein.
    
 0.891
Bag2
BAG family molecular chaperone regulator 2.
    
 0.886
Slc39a7
Solute carrier family 39 (zinc transporter), member 7.
 
 
    0.878
Trp53
Cellular tumor antigen p53 isoform X1.
   
 0.854
Hsp90ab1
Heat shock protein HSP 90-beta.
    
 0.850
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.