STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zswim8Zinc finger SWIM domain-containing protein 8 isoform X1. (1834 aa)    
Predicted Functional Partners:
Ecm1
Extracellular matrix protein 1 isoform X1.
      
 0.667
Rbx1
E3 ubiquitin-protein ligase RBX1.
     
 0.626
Cul2
LOW QUALITY PROTEIN: cullin-2.
     
 0.593
Caap1
Caspase activity and apoptosis inhibitor 1 isoform X1.
      
 0.536
Eloc
Transcription elongation factor B polypeptide 1 isoform X1.
    
 0.501
Mrps14
28S ribosomal protein S14, mitochondrial.
      
 0.461
ENSCCNP00000013430
annotation not available
    
 0.458
Elob
Transcription elongation factor B polypeptide 2.
    
 0.458
ENSCCNP00000008185
annotation not available
    
 0.447
ENSCCNP00000002154
annotation not available
    
 0.442
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.