STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tgm2Protein-glutamine gamma-glutamyltransferase 2 isoform X1. (687 aa)    
Predicted Functional Partners:
Rhag
Ammonium transporter Rh type A isoform X1.
   
 
 0.672
Tsg101
Tumor susceptibility gene 101 protein.
   
  
 0.580
Tor1a
Torsin-1A.
      
 0.579
Vwa1
LOW QUALITY PROTEIN: von Willebrand factor A domain-containing protein 1.
   
 
 0.560
Vsig1
V-set and immunoglobulin domain containing 1.
      
 0.551
Sdc4
Syndecan 4.
      
 0.537
Adgrg1
Adhesion G-protein coupled receptor G1 isoform X1.
   
  
 0.530
Slc4a2
Solute carrier family 4 (anion exchanger), member 2.
   
 
 0.470
Rhd
Rhesus blood group glycoprotein.
   
 
 0.470
Slc4a1
Solute carrier family 4 (anion exchanger), member 1.
   
 
 0.470
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.