STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aars2Alanine--tRNA ligase, mitochondrial. (985 aa)    
Predicted Functional Partners:
Eprs
LOW QUALITY PROTEIN: bifunctional glutamate/proline--tRNA ligase.
  
 
 0.934
Cdc16
Cell division cycle protein 16 homolog isoform X1.
   
 0.926
Anapc4
Anaphase-promoting complex subunit 4.
   
 0.925
Anapc5
Anaphase-promoting complex subunit 5 isoform X1.
   
 0.923
Anapc1
Anaphase-promoting complex subunit 1 isoform X1.
   
 0.920
Anapc2
Anaphase promoting complex subunit 2.
    
 0.917
Yars
Tyrosine--tRNA ligase, cytoplasmic.
  
 
 0.914
Aars
Alanine--tRNA ligase, cytoplasmic.
  
  
 
0.904
Anapc7
Anaphase-promoting complex subunit 7.
   
 0.902
Vars2
Valine--tRNA ligase, mitochondrial isoform X1.
  
  
 0.899
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.