STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000015461annotation not available (90 aa)    
Predicted Functional Partners:
Sgca
Alpha-sarcoglycan.
   
 
 0.792
Dag1
Dystroglycan 1.
    
 
 0.745
Sspn
Sarcospan.
   
 
 0.719
Flnc
LOW QUALITY PROTEIN: filamin-C.
   
 
 0.636
Bgn
Biglycan.
   
  
 0.568
Fkrp
LOW QUALITY PROTEIN: fukutin-related protein.
      
 0.548
Dysf
Dysferlin isoform X1.
    
 
 0.533
Nos1ap
Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like.
      
 0.522
Sgcz
Zeta-sarcoglycan isoform X1.
  
  
0.512
Capn3
Calpain-3 isoform X1.
   
  
 0.508
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.