STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hacd2Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1. (275 aa)    
Predicted Functional Partners:
Hsd17b12
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase.
   
 0.966
Elovl6
Elongation of very long chain fatty acids protein 6.
   
 
 0.938
Elovl2
Elongation of very long chain fatty acids protein 2.
    
 0.918
Elovl4
Elongation of very long chain fatty acids protein 4.
    
 0.918
Elovl5
Elongation of very long chain fatty acids protein 5.
    
 0.918
Hacd4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1.
  
  
0.915
ENSCCNP00000012844
LOW QUALITY PROTEIN: acyl-CoA desaturase 1-like.
     
 0.907
ENSCCNP00000015594
Stearoyl-CoA desaturase (Delta-9 desaturase).
     
 0.907
Scd
Stearoyl-CoA desaturase (Delta-9 desaturase).
     
 0.907
ENSCCNP00000017125
Stearoyl-CoA desaturase (Delta-9 desaturase).
     
 0.907
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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