STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbll1E3 ubiquitin-protein ligase Hakai isoform X1. (499 aa)    
Predicted Functional Partners:
ENSCCNP00000010672
Protein virilizer homolog.
    
 
 0.837
Kiaa1429
Protein virilizer homolog isoform X1.
    
 
 0.837
ENSCCNP00000003637
annotation not available
    
 
 0.826
ENSCCNP00000014520
annotation not available
    
 
 0.826
Wtap
Pre-mRNA-splicing regulator WTAP.
    
 
 0.826
Cdh1
Cadherin 1, type 1, E-cadherin.
    
 
 0.771
ENSCCNP00000001765
annotation not available
    
 
 0.762
Zc3h13
Zinc finger CCCH domain-containing protein 13 isoform X1.
    
 
 0.748
Mettl3
N6-adenosine-methyltransferase 70 kDa subunit isoform X1.
    
 
 0.734
Mettl14
MRNA m6A methyltransferase non-catalytic subunit.
    
 
 0.734
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.