STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E2f6Transcription factor E2F6 isoform X1. (271 aa)    
Predicted Functional Partners:
Tfdp1
Transcription factor Dp-1 isoform X1.
   
 0.955
Pcgf6
Polycomb group RING finger protein 6.
    
 0.933
L3mbtl2
Lethal(3)malignant brain tumor-like protein 2 isoform X1.
    
 0.925
Tfdp2
Transcription factor Dp-2 isoform X1.
  
 0.894
Rnf2
E3 ubiquitin-protein ligase RNF1/2.
    
 0.882
Ring1
E3 ubiquitin-protein ligase RING1 isoform X1.
    
 0.882
Rybp
RING1 and YY1-binding protein.
   
 0.874
ENSCCNP00000005319
annotation not available
   
 0.866
Mga
MAX gene-associated protein isoform X1.
    
 0.825
Pcgf1
Polycomb group RING finger protein 1 isoform X1.
    
 0.824
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.