STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zdhhc6Palmitoyltransferase ZDHHC6. (413 aa)    
Predicted Functional Partners:
Zdhhc4
Probable palmitoyltransferase ZDHHC4 isoform X1.
      
0.572
Sppl2a
Signal peptide peptidase-like 2A isoform X1.
      
 0.551
Tectb
Beta-tectorin.
      
 0.550
Zdhhc24
Probable palmitoyltransferase ZDHHC24 isoform X1.
   
 
0.501
Plekhs1
LOW QUALITY PROTEIN: pleckstrin homology domain-containing family S member 1.
      
 0.487
ENSCCNP00000015264
NHL repeat-containing protein 2 isoform X1.
      
 0.487
Ccdc186
Coiled-coil domain-containing protein 186.
      
 0.487
Zdhhc22
Palmitoyltransferase ZDHHC22.
   
 
0.485
Zdhhc21
Palmitoyltransferase ZDHHC21.
   
 
0.482
Zdhhc17
Palmitoyltransferase ZDHHC13/17.
      
0.473
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.