STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000015973Zinc finger MYM-type protein 2-like isoform X1. (284 aa)    
Predicted Functional Partners:
Zmym3
LOW QUALITY PROTEIN: zinc finger MYM-type protein 3-like.
 
  
 
 0.915
Zmym2
Zinc finger MYM-type protein 2.
 
      0.900
Zmym4
Zinc finger MYM-type protein 4 isoform X1.
 
 
 
 0.829
Kdm1a
Lysine (K)-specific demethylase 1A.
   
 0.657
Hdac1
Histone deacetylase 1/2.
   
 0.553
Rcor1
REST corepressor 1.
   
 
 0.535
Pgbd5
PiggyBac transposable element-derived protein 5.
    
 
 0.527
Qrich1
LOW QUALITY PROTEIN: glutamine-rich protein 1.
 
 
 0.522
Harbi1
Putative nuclease HARBI1.
     
 0.488
Fgfr1
Fibroblast growth factor receptor 1 isoform X1.
   
 0.485
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.