STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sbno1Protein strawberry notch homolog 1 isoform X1. (1392 aa)    
Predicted Functional Partners:
Ankrd17
Ankyrin repeat domain-containing protein 17 isoform X1.
   
   0.592
Pds5a
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
   
  
 0.557
Btaf1
TATA-binding protein-associated factor 172 isoform X1.
   
    0.550
Wapl
Wings apart-like protein homolog.
   
    0.529
Birc6
Baculoviral IAP repeat-containing protein 6 isoform X1.
   
    0.503
Il22ra2
Interleukin-22 receptor subunit alpha-2.
      
 0.451
Rasgef1a
Ras-GEF domain-containing family member 1A.
      
 0.447
ENSCCNP00000008954
E3 ubiquitin-protein ligase listerin-like.
   
    0.446
ENSCCNP00000019601
LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase listerin-like.
   
    0.446
ENSCCNP00000019613
annotation not available
   
    0.446
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.