STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000016058annotation not available (144 aa)    
Predicted Functional Partners:
Snrpd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.992
Snrpd1
Small nuclear ribonucleoprotein Sm D1.
    
 0.991
Snrpn
Small nuclear ribonucleoprotein-associated protein N isoform X1.
    
 0.972
Snrpa1
U2 small nuclear ribonucleoprotein A.
   
 0.969
Smn1
Survival motor neuron protein isoform X1.
    
 0.933
ENSCCNP00000022185
annotation not available
    
 0.933
Snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 0.928
Gemin5
Gem-associated protein 5 isoform X1.
    
 0.866
ENSCCNP00000014681
annotation not available
    
  0.863
Snrpf
Small nuclear ribonucleoprotein F.
    
  0.863
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.