STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cbln4Cerebellin-4. (201 aa)    
Predicted Functional Partners:
Strc
LOW QUALITY PROTEIN: stereocilin.
      
 0.561
Rfx8
DNA-binding protein RFX8.
      
 0.521
Zmym3
LOW QUALITY PROTEIN: zinc finger MYM-type protein 3-like.
      
 0.448
Parm1
Prostate androgen-regulated mucin-like protein 1.
      
 0.446
Neo1
Neogenin.
   
 
 0.440
Prkcsh
Glucosidase 2 subunit beta isoform X1.
      
 0.408
Tectb
Beta-tectorin.
      
 0.408
Otogl
Otogelin-like.
      
 0.404
Slc16a13
MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 13.
      
 0.404
ENSCCNP00000027540
LOW QUALITY PROTEIN: otogelin-like.
      
 0.404
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.