STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ptk7Inactive tyrosine-protein kinase 7. (1063 aa)    
Predicted Functional Partners:
Wnt5a
Wingless-type MMTV integration site family, member 5.
   
 0.757
Hgfac
Hepatocyte growth factor activator isoform X1.
    
 0.754
Habp2
Hyaluronan binding protein 2.
    
 0.754
ENSCCNP00000025365
annotation not available
    
 0.754
Lrit1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
 0.712
Lrit3
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 3.
    
 0.712
Wnt2
Wingless-type MMTV integration site family, member 2.
   
 0.678
Ngf
LOW QUALITY PROTEIN: beta-nerve growth factor.
    
 0.651
Ntf3
Neurotrophin-3 isoform X1.
    
 0.651
Dvl1
Segment polarity protein dishevelled homolog DVL-1 isoform X1.
    
 0.644
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.