STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Npm3Nucleophosmin 3. (175 aa)    
Predicted Functional Partners:
Npm1
Nucleophosmin 1.
   
 
0.755
Mgea5
Protein O-GlcNAcase / histone acetyltransferase.
 
    
 0.711
ENSCCNP00000016499
annotation not available
   
 
0.643
Ogt
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1.
   
 
 0.629
Vgll4
Transcription cofactor vestigial-like protein 4 isoform X1.
      
 0.535
Ttc6
Tetratricopeptide repeat protein 6.
   
 
 0.504
Fgf8
Fibroblast growth factor 8.
 
  
 
 0.500
Fgf17
Fibroblast growth factor 17 isoform X1.
 
  
 
 0.459
ENSCCNP00000016757
annotation not available
      
 0.445
Tmem167a
Protein kish-A.
      
 0.445
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.