STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phf23PHD finger protein 23 isoform X1. (463 aa)    
Predicted Functional Partners:
Kansl2
LOW QUALITY PROTEIN: KAT8 regulatory NSL complex subunit 2.
    
 0.814
Mcrs1
Microspherule protein 1 isoform X1.
   
 0.785
Tex30
Testis-expressed sequence 30 protein isoform X1.
    
 0.709
Kansl3
KAT8 regulatory NSL complex subunit 3 isoform X1.
    
 0.709
Nup98
Nuclear pore complex protein Nup98-Nup96 isoform X1.
    
 
 0.589
Kat7
Histone acetyltransferase KAT7 isoform X1.
   
 0.536
Kdm5a
Lysine (K)-specific demethylase 5A.
   
 
 0.525
Rbbp5
Retinoblastoma-binding protein 5 isoform X1.
    
 0.513
Sin3b
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3b.
    
 0.512
Sin3a
LOW QUALITY PROTEIN: paired amphipathic helix protein Sin3a.
    
 0.497
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.