STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eif5aEukaryotic translation initiation factor 5A-1. (154 aa)    
Predicted Functional Partners:
ENSCCNP00000006766
annotation not available
   
 
 0.992
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 
 0.992
ENSCCNP00000026563
annotation not available
   
 
 0.992
Rps18
Small subunit ribosomal protein S18e.
  
 
 0.964
Rps11
Small subunit ribosomal protein S11e.
   
 
 0.964
Rps15
Small subunit ribosomal protein S15e.
   
 
 0.961
Rpl5
60S ribosomal protein L5 isoform X1.
   
 
 0.961
Rpl11
Large subunit ribosomal protein L11e.
   
 
 0.956
Mrps9
28S ribosomal protein S9, mitochondrial isoform X1.
  
 
 0.947
Rpl13
Large subunit ribosomal protein L13e.
   
 
 0.945
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.