STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Skor1SKI family transcriptional corepressor 1 isoform X1. (934 aa)    
Predicted Functional Partners:
Map2k5
Mitogen-activated protein kinase kinase 5.
 
    
 0.755
Alkal2
Protein FAM150B.
      
 0.651
Gpr61
Probable G-protein coupled receptor 61.
      
 0.541
Btbd9
BTB/POZ domain-containing protein 9 isoform X1.
      
 0.540
Smad3
Mothers against decapentaplegic homolog 3 isoform X1.
    
 
 0.463
Hoxa7
Homeobox protein HoxA/B7.
    
 
 0.419
Fam57b
Protein FAM57B.
      
 0.412
Loxhd1
Lipoxygenase homology domain-containing protein 1.
      
 0.410
Pkp1
LOW QUALITY PROTEIN: plakophilin-1.
      
 0.402
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.