STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000016882annotation not available (157 aa)    
Predicted Functional Partners:
Wrn
Werner syndrome ATP-dependent helicase.
   
 0.957
Rad1
Cell cycle checkpoint protein RAD1.
    
 0.956
Rad17
Cell cycle checkpoint protein RAD17.
   
 0.939
Rad9a
Cell cycle checkpoint control protein RAD9A isoform X1.
    
 0.937
Rfc4
Replication factor C subunit 2/4.
   
 0.931
Rfc2
Replication factor C subunit 2 isoform X1.
   
 0.919
Rfc3
Replication factor C subunit 3/5.
   
 0.904
Rfc5
Replication factor C subunit 3/5.
   
 0.891
Cdca7l
Cell division cycle-associated 7-like protein isoform X1.
    
 0.856
Atr
LOW QUALITY PROTEIN: serine/threonine-protein kinase ATR.
   
 0.810
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.