STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrm3RRNA methyltransferase 3, mitochondrial isoform X1. (422 aa)    
Predicted Functional Partners:
Malsu1
Mitochondrial assembly of ribosomal large subunit protein 1.
   
 
 0.970
Mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.961
Mrpl13
39S ribosomal protein L13, mitochondrial.
  
 
 0.930
Mrpl17
LOW QUALITY PROTEIN: 39S ribosomal protein L17, mitochondrial.
  
 
 0.913
Mrpl3
39S ribosomal protein L3, mitochondrial.
   
 
 0.913
Mrpl11
39S ribosomal protein L11, mitochondrial.
   
 
 0.909
Mrpl21
39S ribosomal protein L21, mitochondrial isoform X1.
   
   0.905
Mrpl24
39S ribosomal protein L24, mitochondrial.
  
   0.903
Mrpl43
39S ribosomal protein L43, mitochondrial.
    
   0.898
Mtg1
Mitochondrial ribosome-associated GTPase 1 isoform X1.
  
 
 0.883
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.