STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Eml3Echinoderm microtubule-associated protein-like 3. (897 aa)    
Predicted Functional Partners:
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
   
 0.653
ENSCCNP00000000273
E3 SUMO-protein ligase RanBP2-like isoform X1.
   
 0.626
Ift140
Intraflagellar transport protein 140 homolog isoform X1.
    
 0.619
Bub3
Mitotic checkpoint protein BUB3 isoform X1.
   
 0.600
ENSCCNP00000002440
Mitotic checkpoint serine/threonine-protein kinase BUB1-like.
   
 0.569
Bub1b
LOW QUALITY PROTEIN: mitotic checkpoint serine/threonine-protein kinase BUB1 beta.
   
 0.569
Taf12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.566
Taf9b
Transcription initiation factor TFIID subunit 9B.
    
 0.561
Taf10
Transcription initiation factor TFIID subunit 10.
    
 0.560
ENSCCNP00000003940
annotation not available
   
 0.552
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.