STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rbbp8nlRBBP8 N-terminal like. (612 aa)    
Predicted Functional Partners:
Cdk5
Cyclin-dependent-like kinase 5 isoform X1.
    
 0.625
Cdk3
Cyclin-dependent kinase 3 isoform X1.
   
 0.472
Ccne1
G1/S-specific cyclin-E1.
    
 0.467
Ccne2
G1/S-specific cyclin-E1.
    
 0.465
Ccna1
Cyclin-A1.
     
 0.453
Ccna2
Cyclin-A2.
     
 0.453
ENSCCNP00000001498
annotation not available
   
 0.429
Cdk2
Cyclin-dependent kinase 2 isoform X1.
   
 0.429
Fibp
Acidic fibroblast growth factor intracellular-binding protein isoform X1.
    
   0.405
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.