STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000017144annotation not available (100 aa)    
Predicted Functional Partners:
ENSCCNP00000017138
annotation not available
 
      0.899
ENSCCNP00000017161
Pre-B-cell leukemia transcription factor 3.
 
      0.898
Hoxb1
Homeobox protein HoxA/B/D1.
    
 0.716
Hoxb5
Homeobox protein HoxA/B/C5.
    
 0.676
Pknox1
LOW QUALITY PROTEIN: homeobox protein PKNOX1.
    
 0.676
Hoxc9
Homeobox protein HoxB/C/D9.
    
 
 0.673
Meis1
Homeobox protein Meis1.
   
 0.660
Hoxb6
Homeobox protein HoxA/B/C6.
    
 0.648
ENSCCNP00000007983
Homeobox protein Meis2.
   
 0.630
ENSCCNP00000026618
Homeobox protein Meis2-like.
   
 0.630
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.