STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HdlbpVigilin. (1268 aa)    
Predicted Functional Partners:
Rack1
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
   
 
 0.681
Apoa4
Apolipoprotein A-IV.
     
 0.580
Treh-2
LOW QUALITY PROTEIN: trehalase.
   
 
 0.549
Eef1g
LOW QUALITY PROTEIN: elongation factor 1-gamma-like.
   
 
 0.539
Slc7a1
Solute carrier family 7 (cationic amino acid transporter), member 1.
   
  
 0.498
Dhx9
ATP-dependent RNA helicase A.
   
 
 0.497
Wdr31
WD repeat-containing protein 31.
   
 
 0.487
Lpl
Lipoprotein lipase.
      
 0.471
Cnbp
Cellular nucleic acid-binding protein isoform X1.
    
 
 0.471
Bax
Apoptosis regulator BAX.
      
 0.450
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.