STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chmp1bCharged multivesicular body protein 1b. (199 aa)    
Predicted Functional Partners:
Chmp2a
Charged multivesicular body protein 2A.
   
0.986
Vta1
Vacuolar protein sorting-associated protein VTA1 homolog.
    
 0.983
Vps4a
Vacuolar protein sorting-associated protein 4A isoform X1.
   
 0.978
Vps4b
Vacuolar protein sorting-associated protein 4B.
   
 0.975
Chmp2b
Charged multivesicular body protein 2B.
   
 0.954
Mlkl
Mixed lineage kinase domain-like protein isoform X1.
    
 0.905
Chmp1a
Charged multivesicular body protein 1a isoform X1.
  
  
 
0.902
2610002M06Rik
Charged multivesicular body protein 1b-2-like.
  
  
 
0.900
ENSCCNP00000024260
Charged multivesicular body protein 3.
 
 
 0.867
Ist1
Vacuolar protein sorting-associated protein IST1.
    
 
 0.844
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.