STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mppe1Ethanolamine phosphate phosphodiesterase. (418 aa)    
Predicted Functional Partners:
Psmb5
Proteasome subunit beta type-5.
 
      0.750
Pgap3
Post-GPI attachment to proteins factor 3.
    
 
 0.723
Cdc27
Cell division cycle protein 27 homolog.
      
 0.703
Psmb8
Proteasome subunit beta type-8.
 
      0.665
Pigb
GPI mannosyltransferase 3 isoform X1.
    
 
 0.663
Pgap2
Post-GPI attachment to proteins factor 2 isoform X1.
    
 
 0.610
Pigg
GPI ethanolamine phosphate transferase 2 isoform X1.
    
 
 0.609
Pigc
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
      
 0.605
Mrpl40
39S ribosomal protein L40, mitochondrial.
      
 0.588
Pigk
GPI-anchor transamidase subunit K.
      
 0.587
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.