STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pef1Peflin. (292 aa)    
Predicted Functional Partners:
ENSCCNP00000027899
Programmed cell death 6-interacting protein isoform X1.
    
 
 0.674
Sec31a
Sec31 homolog A (S. cerevisiae).
    
 
 0.606
ENSCCNP00000032900
annotation not available
    
 
 0.606
Klhl12
Kelch-like protein 12.
    
 
 0.592
Hebp2
Heme-binding protein 2 isoform X1.
    
 
 0.538
ENSCCNP00000007779
Grancalcin-like.
  
  
0.466
Anxa11
Annexin A11 isoform X1.
   
 0.466
Tsg101
Tumor susceptibility gene 101 protein.
   
 
 0.456
Capn6
Calpain-6.
   
 0.426
Capn5
Calpain-5.
   
 0.426
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.