STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Golph3Golgi phosphoprotein 3. (235 aa)    
Predicted Functional Partners:
Copb1
Coatomer subunit beta.
    
 
 0.658
Myo18a
Unconventional myosin-XVIIIa isoform X1.
    
 
 0.649
Arcn1
Coatomer subunit delta.
    
 
 0.648
Copa
Coatomer subunit alpha.
    
 
 0.629
ENSCCNP00000000420
Phosphatidylinositide phosphatase SAC1 isoform X1.
    
 
 0.600
ENSCCNP00000005968
annotation not available
    
 
 0.600
ENSCCNP00000006003
annotation not available
    
 
 0.600
Pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 
 0.600
Sec24b
Protein transport protein Sec24B isoform X1.
      
 0.591
Ppef1
Serine/threonine-protein phosphatase with EF-hands 1.
   
  
 0.585
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.