STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cdk2ap2Cyclin-dependent kinase 2-associated protein 2. (127 aa)    
Predicted Functional Partners:
Gatad2b
Transcriptional repressor p66-beta.
    
 
 0.537
Slu7
Pre-mRNA-processing factor SLU7.
      
 0.536
Gatad2a
LOW QUALITY PROTEIN: transcriptional repressor p66-alpha.
    
 
 0.536
Zmynd8
Protein kinase C-binding protein 1 isoform X1.
    
 
 0.491
Mbd2
LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2.
   
 
 0.465
Mbd3l1
Methyl-CpG-binding domain protein 3-like 1.
   
 
 0.465
Mbd3
Methyl-CpG-binding domain protein 3 isoform X1.
   
 
 0.465
Manf
Mesencephalic astrocyte-derived neurotrophic factor.
   
  
 0.461
Chd4
Chromodomain-helicase-DNA-binding protein 4 isoform X1.
   
 
 0.412
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.