STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrp4Low-density lipoprotein receptor-related protein 4. (1905 aa)    
Predicted Functional Partners:
Agrn
Agrin.
    
 0.977
ENSCCNP00000006869
annotation not available
 
   
 0.884
Musk
Muscle, skeletal receptor tyrosine-protein kinase isoform X1.
   
 0.871
Ldlrap1
Low density lipoprotein receptor adapter protein 1 isoform X1.
    
 0.619
Dab2
LOW QUALITY PROTEIN: disabled homolog 2.
    
 0.611
Dkk1
Dickkopf-related protein 1.
    
 0.596
Ankra2
Ankyrin repeat family A protein 2 isoform X1.
    
 0.577
Pcsk9
Proprotein convertase subtilisin/kexin type 9.
    
 0.565
ENSCCNP00000010977
annotation not available
    
 0.552
ENSCCNP00000019524
Intersectin-2-like isoform X1.
    
 0.552
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.