STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Atoh8Protein atonal homolog 8 isoform X1. (319 aa)    
Predicted Functional Partners:
Olfml1
LOW QUALITY PROTEIN: olfactomedin-like protein 1.
      
 0.651
Mrgprf
Mas-related G protein-coupled receptor member F.
      
 0.584
Efemp2
EGF-containing fibulin-like extracellular matrix protein 2 isoform X1.
      
 0.581
Vgll3
Transcription cofactor vestigial-like protein 3 isoform X1.
      
 0.579
Prrx2
Paired mesoderm homeobox protein 2.
      
 0.573
Fkbp10
LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase FKBP10.
      
 0.572
Copz2
Coatomer subunit zeta-2 isoform X1.
      
 0.569
Tgfb1i1
Transforming growth factor beta-1-induced transcript 1 protein.
      
 0.554
Srpx2
Sushi repeat-containing protein SRPX2.
      
 0.532
ENSCCNP00000028567
annotation not available
    
 
 0.475
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.