STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfand1AN1-type zinc finger protein 1 isoform X1. (268 aa)    
Predicted Functional Partners:
Vcp
Transitional endoplasmic reticulum ATPase isoform X1.
    
 
 0.713
Spata5l1
LOW QUALITY PROTEIN: spermatogenesis-associated protein 5-like protein 1.
    
 
 0.616
Spata5
Spermatogenesis-associated protein 5 isoform X1.
    
 
 0.616
Uba52
Ubiquitin-60S ribosomal protein L40 isoform X1.
   
 
 0.530
ENSCCNP00000005380
Katanin p60 ATPase-containing subunit A-like 2.
   
 
 0.442
Psmd1
26S proteasome non-ATPase regulatory subunit 1.
    
 
 0.436
ENSCCNP00000003979
annotation not available
    
 
 0.436
Mgrn1
E3 ubiquitin-protein ligase MGRN1 isoform X1.
      
 0.408
Zfand6
AN1-type zinc finger protein 6.
      
 0.403
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.