STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000018649annotation not available (217 aa)    
Predicted Functional Partners:
ENSCCNP00000006766
annotation not available
   
 0.997
Fau
Ubiquitin-like protein fubi and ribosomal protein S30.
   
 0.997
ENSCCNP00000026563
annotation not available
   
 0.997
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
    
 0.989
Rpl5
60S ribosomal protein L5 isoform X1.
  
 0.986
Rpl11
Large subunit ribosomal protein L11e.
  
 0.984
Rpl19
Large subunit ribosomal protein L19e.
   
 0.983
Rpl32
Large subunit ribosomal protein L32e.
   
 0.981
Rpl4
Large subunit ribosomal protein L4e.
  
 0.981
Rpl24
Large subunit ribosomal protein L24e.
   
 0.980
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.