STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nsun45-methylcytosine rRNA methyltransferase NSUN4. (381 aa)    
Predicted Functional Partners:
Mterf4
Transcription termination factor 4, mitochondrial.
    
 0.975
Noc2l
Nucleolar complex protein 2 homolog.
   
 
 0.802
Brix1
Ribosome biogenesis protein BRX1 homolog.
   
 
 0.777
Mrm2
23S rRNA (uridine2552-2'-O)-methyltransferase.
  
 
 0.774
Malsu1
Mitochondrial assembly of ribosomal large subunit protein 1.
  
 
 0.765
Mtg1
Mitochondrial ribosome-associated GTPase 1 isoform X1.
   
 
 0.763
ENSCCNP00000031473
annotation not available
   
 
 0.761
Mrpl2
39S ribosomal protein L2, mitochondrial isoform X1.
   
   0.757
Mrpl33
39S ribosomal protein L33, mitochondrial.
    
 
 0.756
Gadd45gip1
LOW QUALITY PROTEIN: growth arrest and DNA damage-inducible proteins-interacting protein 1.
   
   0.753
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.