STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gjd4Gap junction protein, delta 4. (352 aa)    
Predicted Functional Partners:
Fxyd4
FXYD domain-containing ion transport regulator 4.
      
 0.614
Tbc1d22b
TBC1 domain family member 22B isoform X1.
      
 0.528
Fam78a
Protein FAM78A.
      
 0.452
Gje1
Gap junction protein, epsilon 1.
      
0.422
ENSCCNP00000002162
annotation not available
      
 0.405
Calhm1
Calcium homeostasis modulator protein 1.
      
 0.405
Phyhip
Phytanoyl-CoA hydroxylase-interacting protein.
      
 0.403
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.