STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Vps9d1VPS9 domain-containing protein 1 isoform X1. (651 aa)    
Predicted Functional Partners:
Spata2l
LOW QUALITY PROTEIN: spermatogenesis-associated protein 2-like protein.
 
   
  0.695
Zfp276
Zinc finger protein 276 isoform X1.
      
 0.570
Polr3a
LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC1.
      
 0.563
Cdhr3
Cadherin-related family member 3.
      
 0.538
Dnd1
Dead end protein homolog 1.
      
 0.533
Dbndd1
LOW QUALITY PROTEIN: dysbindin domain-containing protein 1.
      
 0.517
Arrdc3
Arrestin domain-containing protein 3 isoform X1.
      
 0.510
Def8
Differentially expressed in FDCP 8 homolog isoform X1.
      
 0.447
Mns1
Meiosis-specific nuclear structural protein 1.
      
 0.445
ENSCCNP00000002705
annotation not available
      
 0.422
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.