STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CompCartilage oligomeric matrix protein. (683 aa)    
Predicted Functional Partners:
Cd47
CD47 antigen (Rh-related antigen, integrin-associated signal transducer).
   
 
 0.940
Itgb3
Integrin beta-3 isoform X1.
    
 0.939
Itgb1
Integrin beta-1 isoform X1.
    
 0.934
Itgav
LOW QUALITY PROTEIN: integrin alpha-V.
   
 0.932
Itga2b
Integrin alpha-IIb.
   
 0.924
Itga3
Integrin alpha-3 isoform X1.
   
 0.914
Cd36
Platelet glycoprotein 4.
   
 0.913
Sdc1
LOW QUALITY PROTEIN: syndecan-1.
    
 0.910
Sdc4
Syndecan 4.
     
 0.903
Itgb5
LOW QUALITY PROTEIN: integrin beta-5-like.
    
 0.768
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.