STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpa3Replication protein A 14 kDa subunit. (121 aa)    
Predicted Functional Partners:
Wrn
Werner syndrome ATP-dependent helicase.
    
 0.998
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
   
 0.996
Rpa2
LOW QUALITY PROTEIN: replication protein A 32 kDa subunit.
   
 0.993
Rmi1
RecQ-mediated genome instability protein 1.
    
 0.988
Top3a
DNA topoisomerase 3-alpha isoform X1.
    
 0.988
Top3b
DNA topoisomerase 3-beta-1 isoform X1.
    
 0.968
Rmi2
RecQ-mediated genome instability protein 2.
   
 
 0.949
Fancm
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
     
 0.900
Rad52
DNA repair and recombination protein RAD52.
    
 0.896
Clspn
Claspin isoform X1.
    
 0.892
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.