STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arid3cAT-rich interactive domain-containing protein 3C isoform X1. (408 aa)    
Predicted Functional Partners:
Smarcb1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1.
    
 
 0.562
Brk1
Chromosome 3 open reading frame 10.
      
 0.560
Pbrm1
Protein polybromo-1 isoform X1.
   
 
 0.544
Sap30
Histone deacetylase complex subunit SAP30.
    
 0.453
Sap30l
Histone deacetylase complex subunit SAP30L.
    
 0.453
Mysm1
LOW QUALITY PROTEIN: histone H2A deubiquitinase MYSM1.
   
 
 0.448
Suds3
Sin3 histone deacetylase corepressor complex component SDS3.
    
 0.437
Brms1
Breast cancer metastasis-suppressor 1 and related proteins.
    
 0.437
ENSCCNP00000026469
annotation not available
    
 0.437
Dctn3
Dynactin subunit 3.
 
    
 0.431
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.