STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tagln2Transgelin-2. (199 aa)    
Predicted Functional Partners:
Efhc1
EF-hand domain-containing protein 1.
   
 
 0.569
ENSCCNP00000031598
LOW QUALITY PROTEIN: vinculin-like.
   
 
 0.548
Wdr1
WD repeat-containing protein 1.
   
 
 0.547
Actr2
Actin-related protein 2 isoform X1.
   
 0.537
Acta2
Actin, aortic smooth muscle.
   
 0.523
ENSCCNP00000017930
Nucleoside diphosphate kinase B.
    
 
 0.518
ENSCCNP00000002821
annotation not available
    
 
 0.506
5730480H06Rik
PACRG-like protein.
    
 
 0.506
Cfap20
Cilia- and flagella-associated protein 20.
    
 
 0.501
4930452B06Rik
Uncharacterized protein C3orf67 homolog isoform X1.
    
 
 0.501
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.