STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PrimpolDNA-directed primase/polymerase protein isoform X1. (93 aa)    
Predicted Functional Partners:
Rpa1
Replication protein A 70 kDa DNA-binding subunit.
   
 
 0.981
Smarcal1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1.
    
 
 0.975
Clspn
Claspin isoform X1.
   
 
 0.951
Timeless
LOW QUALITY PROTEIN: protein timeless homolog.
   
 
 0.948
ENSCCNP00000019264
annotation not available
   
 
 0.944
Rfwd3
E3 ubiquitin-protein ligase RFWD3 isoform X1.
    
 
 0.934
Zranb3
LOW QUALITY PROTEIN: DNA annealing helicase and endonuclease ZRANB3.
    
 
 0.875
ENSCCNP00000019269
LOW QUALITY PROTEIN: TIMELESS-interacting protein-like.
   
 
 0.825
Rpa2
LOW QUALITY PROTEIN: replication protein A 32 kDa subunit.
   
 
 0.808
Rpa3
Replication protein A 14 kDa subunit.
   
 
 0.807
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.