STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboat7Lysophospholipid acyltransferase 7. (344 aa)    
Predicted Functional Partners:
Lclat1
Lysocardiolipin and lysophospholipid acyltransferase.
     
 0.910
Agpat3
Lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase.
     
 0.908
Agpat4
Lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase.
     
 0.908
Tmc4
LOW QUALITY PROTEIN: transmembrane channel-like protein 4.
 
    
 0.722
Pnpla3
Patatin-like phospholipase domain-containing protein 3.
      
 0.556
Otud7b
OTU domain-containing protein 7B isoform X1.
      
 0.537
Meis1
Homeobox protein Meis1.
      
 0.535
Crbn
Protein cereblon.
   
  
 0.474
CUNH6orf141
Uncharacterized protein C6orf141 homolog.
      
 0.468
Msrb2
Methionine-R-sulfoxide reductase B2, mitochondrial.
      
 0.463
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.