STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pan3PAB-dependent poly(A)-specific ribonuclease subunit PAN3 isoform X1. (886 aa)    
Predicted Functional Partners:
Pan2
LOW QUALITY PROTEIN: PAB-dependent poly(A)-specific ribonuclease subunit PAN2.
  
 
 0.999
Pabpc4l
Polyadenylate-binding protein 4-like.
    
 0.766
Pabpc1
Polyadenylate-binding protein 1 isoform X1.
    
 0.766
Pabpc1l
poly(A) binding protein, cytoplasmic 1-like.
    
 0.766
ENSCCNP00000023614
annotation not available
    
 0.766
Pabpc4
Polyadenylate-binding protein 4 isoform X1.
    
 0.766
Tnrc6c
Trinucleotide repeat-containing gene 6C protein isoform X1.
   
 
 0.742
Rexo1
RNA exonuclease 1 homolog.
    
 0.737
Isg20
Interferon-stimulated gene 20 kDa protein.
    
 0.737
Aen
Apoptosis-enhancing nuclease isoform X1.
    
 0.737
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.