STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chst5Carbohydrate 6-sulfotransferase 6. (394 aa)    
Predicted Functional Partners:
Lum
Lumican.
     
 0.692
Kera
Keratocan.
     
 0.586
Chst13
Chondroitin 4-sulfotransferase 13.
   
  
 0.505
B3gnt7
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7.
      
 0.489
Ogn
Osteoglycin (osteoinductive factor, mimecan).
     
 0.449
Chst8
Carbohydrate sulfotransferase 8 isoform X1.
      
 0.448
Ubiad1
UbiA prenyltransferase domain-containing protein 1 isoform X1.
      
 0.447
Sult1c1
Sulfotransferase family, cytosolic, 1C, member 1.
   
  
 0.428
Sult1e1
Estrogen sulfotransferase-like.
   
  
 0.427
St3gal6
Neolactotetraosylceramide alpha-2,3-sialyltransferase (sialyltransferase 10).
      
 0.412
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.