STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PctpPhosphatidylcholine transfer protein isoform X1. (214 aa)    
Predicted Functional Partners:
Acot13
Acyl-coenzyme A thioesterase 13.
    
 
 0.618
Stard5
StAR-related lipid transfer protein 5.
   
  
 0.601
Stard3
StAR-related lipid transfer protein 3.
      
 0.593
Stard4
StAR-related lipid transfer protein 4 isoform X1.
      
 0.585
Stard6
StAR-related lipid transfer protein 6.
      
 0.575
Stard10
StAR-related lipid transfer protein 10.
      
0.457
Col4a3bp
Collagen type IV alpha-3-binding protein isoform X1.
      
 0.451
ENSCCNP00000013210
annotation not available
      
 0.448
Gramd1c
GRAM domain-containing protein 1C.
      
 0.407
Stxbp4
Syntaxin-binding protein 4.
      
 0.404
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.