STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCCNP00000020124annotation not available (104 aa)    
Predicted Functional Partners:
Ryr1
LOW QUALITY PROTEIN: ryanodine receptor 1.
    
 0.836
Tgfbr1
TGF-beta receptor type-1.
   
 0.825
Ppp3r1
Serine/threonine-protein phosphatase 2B regulatory subunit.
   
 0.811
Ryr3
Ryanodine receptor 3.
    
 0.741
Acvr1
Activin receptor type-1 isoform X1.
    
 0.741
Ryr2
LOW QUALITY PROTEIN: ryanodine receptor 2.
    
 0.690
Ppp3cb
Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform isoform X1.
    
 0.647
Ppp3ca
LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like.
    
 0.647
Bmpr1b
Bone morphogenetic protein receptor type-1B isoform X1.
    
 0.639
ENSCCNP00000030806
Serine/threonine-protein kinase mTOR-like.
    
 
 0.626
Your Current Organism:
Castor canadensis
NCBI taxonomy Id: 51338
Other names: American beaver, C. canadensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.